I'm trying to run a basic R Markdown document (that calls python in code chunks) through Pweave
. In the Pweave
documentation it states that you can declare code chunks using the style ```{python}
. However when I try to compile using, for example, pweave -f pandoc FIR_design.mdw
the chunks are not run and instead placed in verbatim.
All the examples in the documentation use the noweb
syntax e.g.
<<fig = True, width = '12 cm', echo = False>>=
from pylab import *
plot(arange(10))
show()
@
The markdown equivalent would be:
```{python, fig = True, width = '12 cm', echo = False}
from pylab import *
plot(arange(10))
show()
```
When I try to run the examples using the markdown syntax it simply adds them in verbatim and doesn't run the chunk. Is this expected? If so, how should I be converting my .Rmd
documents to make them runable in Pweave
. Must I convert them to noweb
style?
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